Phylogeny and Detection of blaTEM, blaSHV, blaCTX-M Genes in Escherichia coli Isolates from Patients with Urinary Tract Infections in Taif Hospitals, Saudi Arabia

Background: Urinary tract infections (UTIs) represent one of the most common diseases that are encountered in clinical practice and are caused mainly by Escherichia coli (E. coli). Aims: The objectives of this study were to identify and compare the blaTEM, blaSHV and blaCTX-M as marker of beta-lactamase genes in E. coli strains isolated from patients with UTIs collecting from King Abdul-Aziz hospital in Taif region, Saudi Arabia. Study Design: In vitro experimental and molecular study. Place and Duration of Study: Genetic engineering and biotechnology unit, Taif University, from September, 2016 to November, 2017. Methodology: Beta-lactame antibiotics are prescribed in most infectious disease including UTIs. Twenty one isolates identified as E. coli using microbial identification and confirmed by 16S rDNA. Results: These isolates were susceptible to Imipenem (100%), Ampicillin (90%) and Cefoxitin, but resistant to Cefepime (38%). Existance of selected bla-genes (blaTEM, blaSHV and blaCTX-M) were detected in the 21 isolates by PCR. Moreover, phylogeny tree was drawn based on 16S rDNA sequence. The results of this study show significant differences in susceptibility to different beta-lactam antibiotics among the bla-genes in E. coli isolates. Conclusion: Therefore, our findings instead of our data provide some new epidemiological information about the clonal nature of E. coli isolated from patients with UTIs in Taif region, KSA.

Molecular and Bacteriological Diagnosis of Mycoplasma Species Infection in Camels at Taif Governorate, Saudi Arabia

Aims: We designed this work to confirm if the PCR technique is more rapid and specific than traditional diagnostic method by culture. Study Design: In vitro experimental and molecular study. Place and Duration of Study: Genetic engineering and biotechnology unit, Taif University, Saudi Arabia from October, 2016 to September, 2017. Methodology: Ninety three nasal and tracheal swabs and lung samples were collected from camel in Taif slaughterhouse, Saudi Arabia. All samples were tested by culture and PCR method using universal primer of 16S rRNA gene. Results: There was no positive result obtained by culture method, but 30 (32.2%) of nasal swabs were positive using PCR method. Moreover, we used species-specific primers for Mycoplasma arginine, M. bovis and M. mycoides subspecies mycoides to identify the isolates at species level, but no positive results obtained with specific primers. These positive samples could be other Mycoplasma species. Conclusion: These results indicate that PCR technique is a specific molecular detection technique for Mycoplasma identification, and more sensitive test. These techniques are simple and fast methods to detect and isolate infected animals.